Stem-loop cpa-MIR167c

Accession

MI0026355

Description

Carica papaya cpa-MIR167c precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

2 open access papers mention cpa-MIR167c
(3 sentences)

Sequence

UGAAGCUGCCAGCAUGAUCUUaaccucucucuuaucaugcagagugaagaucagaucauauggcaguuucacc
(((((((((((..(((((((...(.((.((((........)))).)).)...))))))).)))))))))))..

Structure

--           GC       Uaa c  u    uau 
  UGAAGCUGCCA  AUGAUCU   c uc cucu   c
  |||||||||||  |||||||   | || ||||    
  acuuugacggu  uacuaga   g ag gaga   a
cc           -a       cua a  u    cgu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR167c

• Accession: MIMAT0031803
• Description: Carica papaya cpa-miR167c mature miRNA
• Sequence: 1 - UGAAGCUGCCAGCAUGAUCUU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682