miRBase entry: bma-mir-268

Stem-loop bma-mir-268


Accession
MI0026294
Description
Brugia malayi bma-mir-268 precursor miRNA
Gene family
MIPF0000280; mir-268


Sequence

uccaauuauuUGAAAUGAUUAGAAGCAGUGUGUUcaauacuuuucccucacuauugaacuucaauuguuucaagaaauuauuucagauaaguuugaaauuuuac
..((((((((((((((((((.((((((((..((((((((............))))))))....))))))))....)))))))))))))))..))).........

Structure
-------uc   --               ---A        --GU        cuuuu 
         caa  uuauuUGAAAUGAUU    GAAGCAGU    GUUcaaua     c
         |||  |||||||||||||||    ||||||||    ||||||||      
         guu  aauagacuuuauuaa    cuuuguua    caaguuau     c
cauuuuaaa   ug               agaa        acuu        cacuc 


Annotation confidence Not enough data
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Comments
This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context
Bmal_v3_scaffold32: 63726-63829 [-]

Database links

Mature bma-miR-268

Accession MIMAT0031745
Description Brugia malayi bma-miR-268 mature miRNA
Sequence 11 - UGAAAUGAUUAGAAGCAGUGUGUU - 34
Evidence not_experimental

References

  1. PubMed ID: 22216965
    Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
    Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
    BMC Genomics (2012) 13:4