miRBase entry: bbe-mir-278

Stem-loop bbe-mir-278


Accession
MI0026229
Description
Branchiostoma belcheri bbe-mir-278 precursor miRNA
Gene family
MIPF0000155; mir-278

Literature search
1 open access papers mention bbe-mir-278
(2 sentences)

Sequence

cucucccccacccgggcgaacaccgucgccagucgucgggcuucagcagaUCGGUGGGGUUUUCGUUCGAGUgggggagacg
.((((((((((.((((((((.(((.(((((.(((..(........)..))).)))))))).)))))))).))))))))))..

Structure
-c          c        c   g     a   gu ggg 
  ucucccccac cgggcgaa acc ucgcc guc  c   c
  |||||||||| |||||||| ||| ||||| |||  |    
  agagggggUG GCUUGCUU UGG GGUGG Uag  g   u
gc          A        U   -     C   ac acu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-278-5p

Accession MIMAT0031659
Description Branchiostoma belcheri bbe-miR-278-5p mature miRNA
Sequence 51 - UCGGUGGGGUUUUCGUUCGAGU - 72
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500