miRBase entry: bbe-mir-210

Stem-loop bbe-mir-210


Accession
MI0026220
Description
Branchiostoma belcheri bbe-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210

Literature search
1 open access papers mention bbe-mir-210
(1 sentences)

Sequence

guaguuggucgguggcauuCGCCUCUGUUUCGCGCGCAAGaugugaugucaguccuucucCUGUGCGUGUGACAGCGGCUGAugcaccggccaaaaagucg
....((((((((((.((((.(((.(((((.(((((((((((.(.(((....)))).)))..)))))))).))))).))).)))))))))))))).......

Structure
---guag          g    C   U     U        --   u u   g 
       uuggucggug cauu GCC CUGUU CGCGCGCA  AGa g gau u
       |||||||||| |||| ||| ||||| ||||||||  ||| | |||  
       aaccggccac guAG CGG GACAG GUGCGUGU  ucu c cug c
gcugaaa          -    U   C     U        Cc   u -   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-210-3p

Accession MIMAT0031644
Description Branchiostoma belcheri bbe-miR-210-3p mature miRNA
Sequence 20 - CGCCUCUGUUUCGCGCGCAAG - 40
Evidence not_experimental

Mature bbe-miR-210-5p

Accession MIMAT0031645
Description Branchiostoma belcheri bbe-miR-210-5p mature miRNA
Sequence 61 - CUGUGCGUGUGACAGCGGCUGA - 82
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500