Stem-loop bbe-mir-200a

Accession

MI0026195

Description

Branchiostoma belcheri bbe-mir-200a precursor miRNA

Gene family

MIPF0000019; mir-8

Literature search

1 open access papers mention bbe-mir-200a
(1 sentences)

Sequence

gacauguuagcuugaauccugacAUCUUACUUGGCAGCAUUCGauguguuuccauauucAAAUACUGCCUGGUAAUGAUGCcagucaaguuuccuuccagu
.....(..(((((((...(((.(((((((((.(((((.(((.((((((....))))))..))).))))).))))).)))).))))))))))..).......

Structure

--gacau uu       auc   a    -     U     C   -C      u 
       g  agcuuga   cug cAUC UUACU GGCAG AUU  Gaugug u
       |  |||||||   ||| |||| ||||| ||||| |||  ||||||  
       c  uugaacu   gac GUAG AAUGG CCGUC UAA  uuauac u
ugaccuu cu       ---   C    U     U     A   Ac      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-200a-3p

• Accession: MIMAT0031606
• Description: Branchiostoma belcheri bbe-miR-200a-3p mature miRNA
• Sequence: 24 - AUCUUACUUGGCAGCAUUCG - 43
• Evidence: not_experimental

Mature bbe-miR-200a-5p

• Accession: MIMAT0031607
• Description: Branchiostoma belcheri bbe-miR-200a-5p mature miRNA
• Sequence: 60 - AAAUACUGCCUGGUAAUGAUGC - 81
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500