miRBase entry: bbe-mir-125b

Stem-loop bbe-mir-125b


Accession
MI0026178
Description
Branchiostoma belcheri bbe-mir-125b precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
1 open access papers mention bbe-mir-125b
(1 sentences)

Sequence

guggagggcguaugucacccagcucccaagauccuaaccugugagccauggacaUCACAAGUUAGGGUCUCAGGGAaugggg
......(((....))).((((..((((.((((((((((.(((((..........))))).))))))))))..)))).)))).

Structure
guggagggcguauguca    gc    -a          c     gcca 
                 ccca  uccc  agauccuaac uguga    u
                 ||||  ||||  |||||||||| |||||     
                 gggu  AGGG  UCUGGGAUUG ACACU    g
----------------g    -a    AC          A     acag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-125b-3p

Accession MIMAT0031581
Description Branchiostoma belcheri bbe-miR-125b-3p mature miRNA
Sequence 55 - UCACAAGUUAGGGUCUCAGGGA - 76
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500