Stem-loop bbe-mir-125a

Accession

MI0026177

Description

Branchiostoma belcheri bbe-mir-125a precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

1 open access papers mention bbe-mir-125a
(1 sentences)

Sequence

guuuguugguguguuccccauUCCCUGAGACCCUAACUUGUGAuguccauggcucACAGGUUAGGAUCUUGGGAGCUgggugacauacgcccuccacaucg
.......((((((((((((((((((.((((.((((((((((((.(((...))))))))))))))).))))))))).)))).)).)))))))..........

Structure

---guuuguu       -  -    -     U    C            u   c 
          ggugugu uc ccca uUCCC GAGA CCUAACUUGUGA guc  
          ||||||| || |||| ||||| |||| |||||||||||| ||| a
          ccgcaua ag gggU GAGGG UUCU GGAUUGGACAcu cgg  
gcuacaccuc       c  u    C     -    A            -   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-125a-5p

• Accession: MIMAT0031579
• Description: Branchiostoma belcheri bbe-miR-125a-5p mature miRNA
• Sequence: 22 - UCCCUGAGACCCUAACUUGUGA - 43
• Evidence: not_experimental

Mature bbe-miR-125a-3p

• Accession: MIMAT0031580
• Description: Branchiostoma belcheri bbe-miR-125a-3p mature miRNA
• Sequence: 56 - ACAGGUUAGGAUCUUGGGAGCU - 77
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500