miRBase entry: ppe-MIR8129

Stem-loop ppe-MIR8129


Accession
MI0026162
Description
Prunus persica ppe-MIR8129 precursor miRNA


Sequence

uauauauaucaguuauucucuuauccgGAUAUCCGCACAUUAUUAUUGuguggaugcuauuguaaacaggcaggaaaauagggagggguaguacaaaauacauggcguccgcacgAUAAUAAUGUCCGGAUGUCAAcguaugagaauuucuguacauauaua
(((((((..(((..((((((.(((...((((((((.((((((((((((((((((((((((.(((.....((...................))......))))))))))))))))))))))))))).))))))))...))).))))))..)))...)))))))

Structure
       -au   uu      u   ccg        C                        u   -aacag  aggaaaau 
uauauau   cag  auucuc uau   GAUAUCCG ACAUUAUUAUUGuguggaugcuau gua      gc        a
|||||||   |||  |||||| |||   |||||||| |||||||||||||||||||||||| |||      ||        g
auauaua   guc  uaagag aug   CUGUAGGC UGUAAUAAUAgcacgccugcggua cau      ug        g
       cau   uu      u   cAA        C                        -   aaaaca  auggggag 


Annotation confidence Not enough data
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Genome context
chrG6: 21765562-21765723 [+]

Database links

Mature ppe-miR8129-5p

Accession MIMAT0031554
Description Prunus persica ppe-miR8129-5p mature miRNA
Sequence 28 - GAUAUCCGCACAUUAUUAUUG - 48
Evidence experimental
Illumina [1]

Mature ppe-miR8129-3p

Accession MIMAT0031555
Description Prunus persica ppe-miR8129-3p mature miRNA
Sequence 116 - AUAAUAAUGUCCGGAUGUCAA - 136
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149