miRBase entry: ppe-MIR2111c

Stem-loop ppe-MIR2111c


Accession
MI0026143
Description
Prunus persica ppe-MIR2111c precursor miRNA
Gene family
MIPF0000754; MIR2111


Sequence

gggUAAUCUGCAUCCUGAGGUUUAgaucaacuucauuauaauaauuguuguaucuagcccuugggaugcagauuaccu
((((((((((((((((((((.((((((((((...............)))).)))))).))))))))))))))))))))

Structure
                    U      -    uucauu 
gggUAAUCUGCAUCCUGAGG UUAgau caac      a
|||||||||||||||||||| |||||| ||||      u
uccauuagacguaggguucc gaucua guug      a
                    c      u    uuaaua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrG4: 5127105-5127182 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppe-MIR2111c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppe-miR2111c

Accession MIMAT0031519
Description Prunus persica ppe-miR2111c mature miRNA
Sequence 4 - UAAUCUGCAUCCUGAGGUUUA - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149