miRBase entry: ppe-MIR827

Stem-loop ppe-MIR827


Accession
MI0026140
Description
Prunus persica ppe-MIR827 precursor miRNA
Gene family
MIPF0001769; MIR827_5

Literature search
1 open access papers mention ppe-MIR827
(2 sentences)

Sequence

uguuuguuuauggucaucuacuuauucugcuucaguauuuuuguacaauuaauauaugacauaaugaUUAGAUGACCAUCAACAAACA
((((((((.(((((((((((.(((((.((..((((((((..(.....)..))))).))))).))))).))))))))))).))))))))

Structure
        u           c     c  cu   -     uu g 
uguuuguu auggucaucua uuauu ug  uca guauu  u u
|||||||| ||||||||||| ||||| ||  ||| |||||  | a
ACAAACAA UACCAGUAGAU aguaa ac  agu uauaa  a c
        C           U     u  --   a     uu a 


Annotation confidence Not enough data
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Genome context
chrG7: 22179391-22179478 [-]

Database links

Mature ppe-miR827

Accession MIMAT0031516
Description Prunus persica ppe-miR827 mature miRNA
Sequence 68 - UUAGAUGACCAUCAACAAACA - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149