miRBase entry: ppe-MIR403

Stem-loop ppe-MIR403


Accession
MI0026135
Description
Prunus persica ppe-MIR403 precursor miRNA
Gene family
MIPF0000290; MIR403

Literature search
2 open access papers mention ppe-MIR403
(2 sentences)

Sequence

gggacacauccccaguuugugcgugaaucgaaccccaucacagccguccaucuuuaugaucacgauguuaacucaauccaauggugUUAGAUUCACGCACAAACUCGggauaugucuc
((((((.(((((.((((((((((((((((.(((.((((.(((..(((..(((.....))).))).)))............)))).))).)))))))))))))))).))))).))))))

Structure
      c     c                g   c    -----------c   gc   cc   u 
gggaca auccc aguuugugcgugaauc aac ccau            aca  cgu  auc u
|||||| ||||| |||||||||||||||| ||| ||||            |||  |||  ||| u
cucugu uaggG UCAAACACGCACUUAG UUg ggua            ugu  gca  uag a
      a     C                A   u    accuaacucaau   -a   -c   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrG1: 9127091-9127208 [+]

Database links

Mature ppe-miR403

Accession MIMAT0031511
Description Prunus persica ppe-miR403 mature miRNA
Sequence 87 - UUAGAUUCACGCACAAACUCG - 107
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149