miRBase entry: ppe-MIR399e

Stem-loop ppe-MIR399e


Accession
MI0026125
Description
Prunus persica ppe-MIR399e precursor miRNA
Gene family
MIPF0000015; MIR399

Literature search
4 open access papers mention ppe-MIR399e
(5 sentences)

Sequence

uaagcaaagcagucauagggcuccucuuucuuggcaggcacuggugacugaugcagcuacaaauguacaaucacuuucauugaccUGCCAAAGAAGAGUUGCCCUAcgauugcuuuggcuua
((((((((((((((.((((((..((((((.((((((((((..(((((.((.((((........)))))).))))).....)).)))))))).))))))..)))))).))))))))).)))))

Structure
     -         a      uc      c        -  ---cu     c  a    gcu 
uaagc aaagcaguc uagggc  cucuuu uuggcagg ca     gguga ug ugca   a
||||| ||||||||| ||||||  |||||| |||||||| ||     ||||| || ||||    
auucg uuucguuag AUCCCG  GAGAAG AACCGUcc gu     ucacu ac augu   c
     g         c      UU      A        a  uacuu     a  -    aaa 


Annotation confidence Not enough data
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Genome context
chrG2: 28345788-28345909 [-]

Database links

Mature ppe-miR399e

Accession MIMAT0031501
Description Prunus persica ppe-miR399e mature miRNA
Sequence 86 - UGCCAAAGAAGAGUUGCCCUA - 106
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149