miRBase entry: ppe-MIR399d

Stem-loop ppe-MIR399d


Accession
MI0026124
Description
Prunus persica ppe-MIR399d precursor miRNA
Gene family
MIPF0000015; MIR399

Literature search
4 open access papers mention ppe-MIR399d
(5 sentences)

Sequence

uaagcaaagcagucauagggcuccucuuucuuggcaggcacuggugacugaugcagcuacaaauguaaaaucacuuucauugaccUGCCAAAGAAGAGUUGCCCUAcgauugcuuuggcuua
((((((((((((((.((((((..((((((.((((((((((..(((((....((((........))))...))))).....)).)))))))).))))))..)))))).))))))))).)))))

Structure
     -         a      uc      c        -  ---cu     cuga    gcu 
uaagc aaagcaguc uagggc  cucuuu uuggcagg ca     gguga    ugca   a
||||| ||||||||| ||||||  |||||| |||||||| ||     |||||    ||||    
auucg uuucguuag AUCCCG  GAGAAG AACCGUcc gu     ucacu    augu   c
     g         c      UU      A        a  uacuu     -aaa    aaa 


Annotation confidence Not enough data
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Genome context
chrG3: 4668519-4668640 [-]

Database links

Mature ppe-miR399d

Accession MIMAT0031500
Description Prunus persica ppe-miR399d mature miRNA
Sequence 86 - UGCCAAAGAAGAGUUGCCCUA - 106
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149