Stem-loop ppe-MIR395k

Accession

MI0026113

Description

Prunus persica ppe-MIR395k precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

3 open access papers mention ppe-MIR395k
(13 sentences)

Sequence

ccuggaguucccuugaacacuucauugggaaaauuauaaggguaguucauauguacccuaauuuauccuaCUGAAGUGUUUGGGGGAACUCuggg
((((((((((((((((((((((((.((((((((((...((((((.........))))))))))).))))).))))))))))))))))))))))))

Structure

                        u     -     aua      guu 
ccuggaguucccuugaacacuuca uggga aaauu   agggua   c
|||||||||||||||||||||||| ||||| |||||   ||||||   a
ggguCUCAAGGGGGUUUGUGAAGU auccu uuuaa   ucccau   u
                        C     a     ---      gua 

Annotation confidence Not enough data

Genome context

chrG1: 27779990-27780084 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppe-MIR395k

Mature ppe-miR395k

• Accession: MIMAT0031489
• Description: Prunus persica ppe-miR395k mature miRNA
• Sequence: 71 - CUGAAGUGUUUGGGGGAACUC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149