Stem-loop ppe-MIR395i

Accession

MI0026111

Description

Prunus persica ppe-MIR395i precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

3 open access papers mention ppe-MIR395i
(13 sentences)

Sequence

uguugucaggugucaccgagaguucccuuacucacuucauugggaaauaauuauuuuugauaaauuauauauccuaCUGAAGUGUUUGGGGGAACUCcugguugcauuugauuuuaca
(((.(((((((((.((((.(((((((((((..(((((((.(((((.((((((..........))))))...))))).)))))))..))))))))))).)))).)))))))))...)))

Structure

   --u         c    a           cu       u     --a      auuu 
ugu   gucaggugu accg gaguucccuua  cacuuca uggga   auaauu    u
|||   ||||||||| |||| |||||||||||  ||||||| |||||   ||||||     
aca   uaguuuacg uggu CUCAAGGGGGU  GUGAAGU auccu   uauuaa    u
   uuu         u    c           UU       C     aua      auag 

Annotation confidence Not enough data

Genome context

chrG1: 27764456-27764573 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from ppe-MIR395i

Mature ppe-miR395i

• Accession: MIMAT0031487
• Description: Prunus persica ppe-miR395i mature miRNA
• Sequence: 77 - CUGAAGUGUUUGGGGGAACUC - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149