Stem-loop ppe-MIR395h

Accession

MI0026110

Description

Prunus persica ppe-MIR395h precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

3 open access papers mention ppe-MIR395h
(13 sentences)

Sequence

gucagaugaccccuagaguuucuuugaccauuucauugggugaugaaccgauaaacgaucuuuuucgauaaguuauuucucaaauagaaguuccuaCUGAAGUGUUUGGGGGAACUCcugggaucauuugau
(((((((((.(((..((((((((((((.(((((((((((........)))))...(((......)))...((..((((((.....))))))..))...)))))).))))))))))))..))).)))))))))

Structure

         c   ua            c      auugggugaugaaccgauaaacgaucuuuuucgaua  uu      c 
gucagauga ccc  gaguuucuuuga cauuuc                                    ag  auuucu a
||||||||| |||  |||||||||||| ||||||                                    ||  |||||| a
uaguuuacu ggg  CUCAAGGGGGUU GUGAAG                                    uc  ugaaga a
         a   uc            U      ---------------------------------UCa  cu      u 

Annotation confidence Not enough data

Genome context

chrG1: 27723037-27723168 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppe-MIR395h

Mature ppe-miR395h

• Accession: MIMAT0031486
• Description: Prunus persica ppe-miR395h mature miRNA
• Sequence: 97 - CUGAAGUGUUUGGGGGAACUC - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149