Stem-loop ppe-MIR395e

Accession

MI0026107

Description

Prunus persica ppe-MIR395e precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

4 open access papers mention ppe-MIR395e
(15 sentences)

Sequence

gucaggugucaccgagaguucccuugaacacuucauugggaaauaauuaguucugaucuauuauguaucccaCUGAAGUGUUUGGGGGAACUCcugguggcauuugau
((((((((((((((.((((((((((((((((((((.(((((.(((((.((.......)))))))...))))).)))))))))))))))))))).))))))))))))))

Structure

              a                    u     --a     u  uu 
gucaggugucaccg gaguucccuugaacacuuca uggga   auaau ag  c
|||||||||||||| |||||||||||||||||||| |||||   ||||| ||  u
uaguuuacgguggu CUCAAGGGGGUUUGUGAAGU acccu   uauua uc  g
              c                    C     aug     -  ua 

Annotation confidence Not enough data

Genome context

chrG1: 27739475-27739582 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from ppe-MIR395e

Mature ppe-miR395e

• Accession: MIMAT0031483
• Description: Prunus persica ppe-miR395e mature miRNA
• Sequence: 73 - CUGAAGUGUUUGGGGGAACUC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149