Stem-loop ppe-MIR395a

Accession

MI0026103

Description

Prunus persica ppe-MIR395a precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

3 open access papers mention ppe-MIR395a
(13 sentences)

Sequence

gcaucagauggccccuagaGUUCCCUCAAACACUUCAUUggagauuauaugccucucucuacuuucuaCUGAAGUGUUUGGGGGGACCCuuggagucauuugaucc
..((((((((((.((.((.((((((((((((((((((.((((((..................)))))).)))))))))))))))))).)).)).))))))))))..

Structure

gc          c  u  a                  U      uuauaugc 
  aucagauggc cc ag GUUCCCUCAAACACUUCA Uggaga        c
  |||||||||| || || |||||||||||||||||| ||||||         
  uaguuuacug gg uC CAGGGGGGUUUGUGAAGU aucuuu        u
cc          a  u  C                  C      caucucuc 

Annotation confidence Not enough data

Genome context

chrG1: 27742367-27742472 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ppe-MIR395a

Mature ppe-miR395a-5p

• Accession: MIMAT0031477
• Description: Prunus persica ppe-miR395a-5p mature miRNA
• Sequence: 20 - GUUCCCUCAAACACUUCAUU - 39
• Evidence: experimental ; Illumina [1]

Mature ppe-miR395a-3p

• Accession: MIMAT0031478
• Description: Prunus persica ppe-miR395a-3p mature miRNA
• Sequence: 69 - CUGAAGUGUUUGGGGGGACCC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149