Stem-loop ppe-MIR172a

Accession

MI0026095

Description

Prunus persica ppe-MIR172a precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

9 open access papers mention ppe-MIR172a
(36 sentences)

Sequence

agucguuguuugcgggcGUAGCAUCAUCAAGAUUCACGcacaugcaauuaacuugaaaguuucucucuuugccaaaguuucuuucaaagugAGAAUCUUGAUGAUGCUGCAUcggcaauaaaccacu
(((.(((..((((.((.((((((((((((((((((..((....)).....(((((((((...((...........))...))))).))))..)))))))))))))))))).)).))))..))).)))

Structure

   c   gu    g  c                  ---------------------------------------------AC  a 
agu guu  uugc gg GUAGCAUCAUCAAGAUUC                                               Gc c
||| |||  |||| || ||||||||||||||||||                                               ||  
uca caa  aacg cU CGUCGUAGUAGUUCUAAG                                               cg a
   c   au    g  A                  Agugaaacuuucuuugaaaccguuucucucuuugaaaguucaauuaa  u 

Annotation confidence Not enough data

Genome context

chrG6: 7627706-7627832 [-]

Mature ppe-miR172a-5p

• Accession: MIMAT0031468
• Description: Prunus persica ppe-miR172a-5p mature miRNA
• Sequence: 18 - GUAGCAUCAUCAAGAUUCACG - 38
• Evidence: experimental ; Illumina [1]

Mature ppe-miR172a-3p

• Accession: MIMAT0031469
• Description: Prunus persica ppe-miR172a-3p mature miRNA
• Sequence: 92 - AGAAUCUUGAUGAUGCUGCAU - 112
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149