Stem-loop ppe-MIR169j

Accession

MI0026091

Description

Prunus persica ppe-MIR169j precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

7 open access papers mention ppe-MIR169j
(20 sentences)

Sequence

ggaagaaagguccuacaugaggauaaagagccuuguuuugUAGCCAAGGAUGACUUGCCUGCagccucccaagggcucucucucucucucuaaauauaauguggcgcuauagcuaagcuugguuuagaauccuugugugaucuacaggcagucuccuuggcuaccgagacagguucuuuuaucucaugcuggaccucuucuucc
(((((((((((((..(((((((..(((((((((.((((((((((((((((.((((.(((((.((..(((((((((.............(((((((......((((......))))......))))))).)))))).).)).)).))))))))))))))))))).)))))))))))))))..)))))))..)))))).)))))))

Structure

       -      ua       au         u      -          U    U     C  cc  - -      cucucucucucuc       auaaug    gc 
ggaagaa aggucc  caugagg  aaagagccu guuuug UAGCCAAGGA GACU GCCUG ag  uc c caaggg             ucuaaau      uggc  u
||||||| ||||||  |||||||  ||||||||| |||||| |||||||||| |||| ||||| ||  || | ||||||             |||||||      ||||   
ccuucuu uccagg  guacucu  uuucuugga cagagc aucgguuccu cuga cggac uc  ag g guuccu             agauuug      aucg  a
       c      uc       au         -      c          -    -     a  -u  u u      ------------a       guucga    au 

Annotation confidence Not enough data

Genome context

chrG1: 23399808-23400011 [-]

Mature ppe-miR169j

• Accession: MIMAT0031463
• Description: Prunus persica ppe-miR169j mature miRNA
• Sequence: 41 - UAGCCAAGGAUGACUUGCCUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149