Stem-loop ppe-MIR160b

Accession

MI0026067

Description

Prunus persica ppe-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

9 open access papers mention ppe-MIR160b
(24 sentences)

Sequence

ugaacauacgcauagauauacaaaguauauaugUGCCUGGCUCCCUGUAUGCCAuuugcagagucccaccgaacaucgauggccuccguggauggcguaugaggagccaugcauauaaacccauguguuuccuguguguguuuca
.(((((((((((..((.(((((..((...(((((((.(((((((.((((((((((((((.(((..(((.(((...))).))).))).)))))))))))))).))))))).))))))).))...))))).)).)))))))))))..

Structure

-u           ua  u     -aa  aua       C       C              a   uc   c   a 
  gaacauacgca  ga auaca   gu   uaugUGC UGGCUCC UGUAUGCCAuuugc gag  cca cga  
  |||||||||||  || |||||   ||   ||||||| ||||||| |||||||||||||| |||  ||| ||| c
  uuugugugugu  cu ugugu   ca   auauacg accgagg guaugcgguaggug cuc  ggu gcu  
ac           -c  u     acc  --a       u       a              c   -c   a   a 

Annotation confidence Not enough data

Genome context

chrG2: 24579519-24579663 [-]

Mature ppe-miR160b

• Accession: MIMAT0031439
• Description: Prunus persica ppe-miR160b mature miRNA
• Sequence: 34 - UGCCUGGCUCCCUGUAUGCCA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149