miRBase entry: ppe-MIR156i

Stem-loop ppe-MIR156i


Accession
MI0026064
Description
Prunus persica ppe-MIR156i precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention ppe-MIR156i
(60 sentences)

Sequence

auguuguggUUGACAGAAGAUAGAGAGCACaaaugaacauauacacccagucacccagacccaggaaaaugauuguguaugaucaguuuugugcucucuuuucuucugccaacauauuauau
(((.((((.(((.(((((((.(((((((((((((((.((((((((..((....((........))....))..)))))))).)))..))))))))))))..))))))).))))))).)))..

Structure
--   u    g   A       -U            --   a        cc  guca  cag 
  aug ugug UUG CAGAAGA  AGAGAGCACaaa  uga cauauaca  ca    cc   a
  ||| |||| ||| |||||||  ||||||||||||  ||| ||||||||  ||    ||    
  uau auac aac gucuucu  ucucucguguuu  acu guaugugu  gu    gg   c
ua   u    -   c       uu            ug   a        ua  aaaa  acc 


Annotation confidence Not enough data
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Genome context
chrG3: 26355154-26355275 [-]

Database links

Mature ppe-miR156i

Accession MIMAT0031436
Description Prunus persica ppe-miR156i mature miRNA
Sequence 10 - UUGACAGAAGAUAGAGAGCAC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149