Stem-loop ath-MIR8121

Accession

MI0026055

Description

Arabidopsis thaliana ath-MIR8121 precursor miRNA

Sequence

auaaauccuuAAAGUAUAAUGGUUUAGUGGUUUGaguuguccuacuaauuguucaagguaacgaguucgaucaacagaccuuaaaaauuaguuaaauguaaguaaaucaaacuauuacaucauuauaguuuuuagguaaau
......(((.(((.(((((((((.(((((((((((........(((((((....(((((...((......)).....)))))...)))))))..............))))))))))).))))))))).)))..))).....

Structure

auaaau   -u   G         U           ------guuguccu       guuc     --aac  gu 
      ccu  AAA UAUAAUGGU UAGUGGUUUGa              acuaauu    aaggu     ga  u
      |||  ||| ||||||||| |||||||||||              |||||||    |||||     ||   
      gga  uuu auauuacua auuaucaaacu              ugauuaa    uucca     cu  c
-uaaau   uu   g         c           aaaugaauguaaau       -aaa     gacaa  ag 

Annotation confidence Not enough data

Genome context

chr2: 16587970-16588110 [-]

Mature ath-miR8121

• Accession: MIMAT0032262
• Description: Arabidopsis thaliana ath-miR8121 mature miRNA
• Sequence: 11 - AAAGUAUAAUGGUUUAGUGGUUUG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23709668
   Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading, and target cleavage
   "Jeong DH, Thatcher SR, Brown RS, Zhai J, Park S, Rymarquis LA, Meyers BC, Green PJ"
   "Plant Physiol (2013) 162:1225-1245