miRBase entry: mmu-mir-8111

Stem-loop mmu-mir-8111


Accession
MI0026043
Symbol
MGI: Mir8111
Description
Mus musculus mmu-mir-8111 precursor miRNA


Sequence

884 reads, 3240 reads per million, 109 experiments
ccaccuaccucugccucaugagugcugggauuaaaggcgugcaccaccacgcccggcgagauacuaauuuuuauacACCGGGCAUGGUAGUGUACACcuuugaucauagcacucagagaaacugaggcaggugggcc
((((((.((((.(.(((.(((((((((.(((((((((.((((((.((((.((((((.(..(((........))).).)))))).)))).)))))).))))))))).))))))))))))...).)))).))))))...

Structure
---      a    u --c   a         g         c      c    c      c ag   cua 
   ccaccu ccuc g   cuc ugagugcug gauuaaagg gugcac acca gcccgg g  aua   a
   |||||| |||| |   ||| ||||||||| ||||||||| |||||| |||| |||||| |  |||    
   ggugga ggag c   gag acucacgau cuaguuucC CAUGUG UGGU CGGGCC c  uau   u
ccg      c    u aaa   -         a         A      A    A      A -a   uuu 


Annotation confidence Low
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Genome context
chr8: 84005628-84005764 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-8111
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-8111

Accession MIMAT0031417
Description Mus musculus mmu-miR-8111 mature miRNA
Sequence 77 - ACCGGGCAUGGUAGUGUACAC - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23185045
    Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
    "Polikepahad S, Corry DB"
    "Nucleic Acids Res (2013) 41:1164-1177