miRBase entry: mmu-mir-8098

Stem-loop mmu-mir-8098


Accession
MI0026026
Symbol
MGI: Mir8098
Description
Mus musculus mmu-mir-8098 precursor miRNA


Sequence

179 reads, 11 reads per million, 49 experiments
gccggcuugcggcuaguguggcggcgguguugguuuuggaagccagagcgggcacauucccuggacaggcggcaggGCUAUGGUCGCUGGCUCCCAAaggcccgcuccgcuucgcagcccgauccugagcgcaagcc
...(((((((((((.(((.(((((.((((..((((((((.(((((..((((.((....(((((.........)))))...)).))))))))).))))).)))))))))))).)))))))...........)))))))

Structure
gcc       -----------    a   u     c    uu   -     a     ga    g  cauu     gac 
   ggcuugc           ggcu gug ggcgg ggug  ggu uuugg agcca  gcgg ca    cccug   a
   |||||||           |||| ||| ||||| ||||  ||| ||||| |||||  |||| ||    |||||   g
   ccgaacg           ccga cgc ucgcc ucgc  ccg aAACC UCGGU  CGCU GU    Gggac   g
---       cgaguccuagc    -   u     -    --   g     C     --    G  -AUC     ggc 


Annotation confidence Not enough data
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Genome context
chr14: 62837721-62837857 [+]

Database links

Mature mmu-miR-8098

Accession MIMAT0031400
Description Mus musculus mmu-miR-8098 mature miRNA
Sequence 77 - GCUAUGGUCGCUGGCUCCCAA - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23185045
    Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
    "Polikepahad S, Corry DB"
    "Nucleic Acids Res (2013) 41:1164-1177