miRBase entry: mmu-mir-8094

Stem-loop mmu-mir-8094


Accession
MI0026021
Symbol
MGI: Mir8094
Description
Mus musculus mmu-mir-8094 precursor miRNA


Sequence

1210 reads, 44 reads per million, 63 experiments
cacggguugcagcaguacuacgugaAACUGAAGGACAACGAGAAGAaccggaagcucuuugaucuucucgauguccucgaguucaaccaggucaguaucgagggucuguguaggcga
....(.(((((.(((.(((.(.(((.(((((((((((.((((((((..((((.....)))).)))))))).))))))..............))))).))).)))))))))))).)..

Structure
cacg g     g   u   a g   A     --------------      A        ac    a 
    g uugca cag acu c uga ACUGA              AGGACA CGAGAAGA  cgga g
    | ||||| ||| ||| | ||| |||||              |||||| ||||||||  |||| c
    c gaugu guc ugg g gcu ugacu              uccugu gcucuucu  guuu u
--ag g     -   -   - a   a     ggaccaacuugagc      a        -a    c 


Annotation confidence Not enough data
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Genome context
chr17: 35251289-35251405 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-8094
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-8094

Accession MIMAT0031395
Description Mus musculus mmu-miR-8094 mature miRNA
Sequence 26 - AACUGAAGGACAACGAGAAGA - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23185045
    Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
    "Polikepahad S, Corry DB"
    "Nucleic Acids Res (2013) 41:1164-1177