miRBase entry: stu-MIR530

Stem-loop stu-MIR530


Accession
MI0025981
Description
Solanum tuberosum stu-MIR530 precursor miRNA
Gene family
MIPF0000521; MIR530

Literature search
1 open access papers mention stu-MIR530
(1 sentences)

Sequence

UCUGCAUUUGCACCUGCACCUuagugaacgaauuuguuagcguauaauucaugcagaaagguguuggugcucaugcagaca
(((((((..(((((.(((((((..((...(((((...........)))))...))..))))))).)))))..)))))))..

Structure
--       UU     U       ag  aac     uguu 
  UCUGCAU  GCACC GCACCUu  ug   gaauu    a
  |||||||  ||||| |||||||  ||   |||||    g
  agacgua  cgugg uguggaa  ac   cuuaa    c
ac       cu     u       ag  gua     uaug 


Annotation confidence Not enough data
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Genome context
JH137965.1: 575880-575960 [+]

Database links

Mature stu-miR530

Accession MIMAT0031330
Description Solanum tuberosum stu-miR530 mature miRNA
Sequence 1 - UCUGCAUUUGCACCUGCACCU - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233