Stem-loop sequence stu-MIR164

Accession

MI0025882 (change log)

Description

Solanum tuberosum miR164 stem-loop

Gene family

MIPF0000045; MIR164

Literature search

7 open access papers mention stu-MIR164
(47 sentences)

Stem-loop

   --      a  -           u     a      acuu 
5'   uggaga gc agggcacaugc gaauu cuugaa    u
     |||||| || ||||||||||| ||||| ||||||     
3'   accucu cg ucucguguacg uuuaa gaacuu    g
   cg      -  a           u     -      auua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (SolTub3.0; GCA_000226075.1): JH138033.1: 603264-603340 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025882

Mature sequence stu-miR164-5p

• Accession: MIMAT0031235
• Sequence: 1 - uggagaagcagggcacaugcu - 21
• Evidence: experimental; Illumina [1]

Mature sequence stu-miR164-3p

• Accession: MIMAT0030973
• Sequence: 57 - caugugcucuagcucuccagc - 77
• Evidence: experimental; Illumina [1]

References

1. PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).