miRBase entry: stu-MIR8048

Stem-loop stu-MIR8048


Accession
MI0025881
Description
Solanum tuberosum stu-MIR8048 precursor miRNA


Sequence

CUCAUUAGCAUCUCCAUCUUGaucaagauuuauugaucuugaugaucaAGAUGGACAUGCUAAUGAACA
.((((((((((.((((((((((((((((((....)))))...))))))))))))).))))))))))...

Structure
--C          C             ---     u 
   UCAUUAGCAU UCCAUCUUGauca   agauu a
   |||||||||| |||||||||||||   |||||  
   AGUAAUCGUA AGGUAGAacuagu   ucuag u
ACA          C             agu     u 


Annotation confidence Not enough data
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Genome context
JH138031.1: 663027-663095 [-]

Database links

Mature stu-miR8048-5p

Accession MIMAT0031234
Description Solanum tuberosum stu-miR8048-5p mature miRNA
Sequence 1 - CUCAUUAGCAUCUCCAUCUUG - 21
Evidence experimental
Illumina [1]

Mature stu-miR8048-3p

Accession MIMAT0030972
Description Solanum tuberosum stu-miR8048-3p mature miRNA
Sequence 49 - AGAUGGACAUGCUAAUGAACA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233