miRBase entry: stu-MIR8044

Stem-loop stu-MIR8044


Accession
MI0025867
Description
Solanum tuberosum stu-MIR8044 precursor miRNA


Sequence

UUUCAAAUAUGGUUGGAGAUGuuugcuugaccaugcuuucagaugaugaguuuucugacaaacaUCUCCAGCGAUAUUUGAAACU
((((((((((.(((((((((((((((..((((((.(........)))).)))....).)))))))))))))).))))))))))..

Structure
--          G              - --uu   -   g uuu 
  UUUCAAAUAU GUUGGAGAUGuuug c    gac cau c   c
  |||||||||| |||||||||||||| |    ||| ||| |    
  AAAGUUUAUA CGACCUCUacaaac g    uug gua g   a
UC          G              a ucuu   a   - uag 


Annotation confidence Not enough data
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Genome context
JH137893.1: 423235-423319 [+]

Database links

Mature stu-miR8044-5p

Accession MIMAT0031223
Description Solanum tuberosum stu-miR8044-5p mature miRNA
Sequence 1 - UUUCAAAUAUGGUUGGAGAUG - 21
Evidence experimental
Illumina [1]

Mature stu-miR8044-3p

Accession MIMAT0030958
Description Solanum tuberosum stu-miR8044-3p mature miRNA
Sequence 65 - UCUCCAGCGAUAUUUGAAACU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233