Stem-loop stu-MIR8043

Accession

MI0025866

Description

Solanum tuberosum stu-MIR8043 precursor miRNA

Sequence

ccaaaguccgauuauaucaacuuuuacuuuuuuucuuuuuagaauaaauaaguggaaauuauccauuucccacuuauuuauucuaaaaagaaaaaaguaaaaguUGAUAUAAUUGGACUUUGGCC
(((((((((((((((((((((((((((((((((.(((((((((((((((((((((((((.....)))).))))))))))))))))))))))))))))))))))))))))))))))))))))))..

Structure

--                                 u                     -    u 
  ccaaaguccgauuauaucaacuuuuacuuuuuu cuuuuuagaauaaauaagugg aaau a
  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| u
  GGUUUCAGGUUAAUAUAGUugaaaaugaaaaaa gaaaaaucuuauuuauucacc uuua c
CC                                 -                     c    c 

Annotation confidence Not enough data

Genome context

JH137885.1: 556154-556278 [+]

Mature stu-miR8043

• Accession: MIMAT0030957
• Description: Solanum tuberosum stu-miR8043 mature miRNA
• Sequence: 105 - UGAUAUAAUUGGACUUUGGCC - 125
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233