Stem-loop stu-MIR8042

Accession

MI0025865

Description

Solanum tuberosum stu-MIR8042 precursor miRNA

Sequence

auaagcacuuccgucuaauuuuugaaagguggucaagggaacgagguggugaaacacaugugaauugacacaacuuucagaaAUUAGACUGAAGUGCUGAUCU
...((((((((.((((((((((((((((.(((((((....(((..(((......))).)))...))))).)).)))))))))))))))).)))))))).....

Structure

--aua        c                g  -     ggga   ag   gu 
     agcacuuc gucuaauuuuugaaag ug gucaa    acg  gug  g
     |||||||| |||||||||||||||| || |||||    |||  |||   
     UCGUGAAG CAGAUUAaagacuuuc ac caguu    ugu  cac  a
UCUAG        U                a  a     -aag   -a   aa 

Annotation confidence Not enough data

Genome context

JH137879.1: 1228667-1228769 [-]

Mature stu-miR8042

• Accession: MIMAT0030956
• Description: Solanum tuberosum stu-miR8042 mature miRNA
• Sequence: 83 - AUUAGACUGAAGUGCUGAUCU - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233