Stem-loop stu-MIR8028

Accession

MI0025841

Description

Solanum tuberosum stu-MIR8028 precursor miRNA

Sequence

UCCUUAUGCUACAAUUGUGAACAAaaaaauccuuuaacuauuccaagauuuuuguaauaaaaguuaagagaagaauguuuauugcaaauuuugggauuguuaaaggauauuuuuuuuuuGUUCAUAAUUAUAGUAUAAGGAUG
(((((((((((.((((((((((((((((((((((((((.(((((((((((..(((((((((.(((........))).)))))))))))))))))))).)))))))))).....)))))))))))))))).)))))))))))..

Structure

--           C                -----          u           uu         a   aag 
  UCCUUAUGCUA AAUUGUGAACAAaaaa     auccuuuaac auuccaagauu  uguaauaaa guu   a
  ||||||||||| ||||||||||||||||     |||||||||| |||||||||||  ||||||||| |||    
  AGGAAUAUGAU UUAAUACUUGuuuuuu     uaggaaauug uaggguuuuaa  acguuauuu uaa   g
GU           A                uuuua          u           --         g   gaa 

Annotation confidence Not enough data

Genome context

JH138358.1: 235499-235641 [-]

Mature stu-miR8028-5p

• Accession: MIMAT0031206
• Description: Solanum tuberosum stu-miR8028-5p mature miRNA
• Sequence: 1 - UCCUUAUGCUACAAUUGUGAACAA - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR8028-3p

• Accession: MIMAT0030932
• Description: Solanum tuberosum stu-miR8028-3p mature miRNA
• Sequence: 120 - GUUCAUAAUUAUAGUAUAAGGAUG - 143
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233