miRBase entry: stu-MIR7990b

Stem-loop stu-MIR7990b


Accession
MI0025827
Description
Solanum tuberosum stu-MIR7990b precursor miRNA


Sequence

aguuaaggacguuugaacuuucccaaauucacagcuaccuuaaucuuuaagauacuGAAUUUUCAAAUGAUCGUAACUUU
(((((..((((((((((..(((..........((.((.(((((...))))).)))))))..)))))))).)).)))))..

Structure
--     ag  -        cu   ccaaauucac  c  c     u 
  aguua  ga cguuugaa  uuc          ag ua cuuaa  
  |||||  || ||||||||  |||          || || ||||| c
  UCAAU  CU GUAAACUU  AAG          uc au gaauu  
UU     -G  A        UU   ----------  -  a     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH138071.1: 26038-26117 [+]

Database links

Mature stu-miR7990b

Accession MIMAT0030918
Description Solanum tuberosum stu-miR7990b mature miRNA
Sequence 57 - GAAUUUUCAAAUGAUCGUAACUUU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233