miRBase entry: stu-MIR8015

Stem-loop stu-MIR8015


Accession
MI0025821
Description
Solanum tuberosum stu-MIR8015 precursor miRNA


Sequence

UAUUGGAUAUUGAAAAUGAAACUUuaguuaucgagauauucaaacuaaaGUUUCAUUUUCAAGGUCCAAUAGC
((((((((.((((((((((((((((((((...((.....)).)))))))))))))))))))).))))))))..

Structure
--        A                    auc  g 
  UAUUGGAU UUGAAAAUGAAACUUuaguu   ga a
  |||||||| ||||||||||||||||||||   || u
  AUAACCUG AACUUUUACUUUGaaaucaa   cu a
CG        G                    --a  u 


Annotation confidence Not enough data
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Genome context
JH138004.1: 952993-953065 [+]

Database links

Mature stu-miR8015-5p

Accession MIMAT0030912
Description Solanum tuberosum stu-miR8015-5p mature miRNA
Sequence 1 - UAUUGGAUAUUGAAAAUGAAACUU - 24
Evidence experimental
Illumina [1]

Mature stu-miR8015-3p

Accession MIMAT0031198
Description Solanum tuberosum stu-miR8015-3p mature miRNA
Sequence 50 - GUUUCAUUUUCAAGGUCCAAUAGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233