miRBase entry: stu-MIR8013

Stem-loop stu-MIR8013


Accession
MI0025818
Description
Solanum tuberosum stu-MIR8013 precursor miRNA


Sequence

AGAAGAAAAUCGCUCCGUCAGAAGcgauuuuagccuuuuggauaaaaaaauuuugaugugccauuuuuauuuau
....((((((.((..((((((((....(((((.((....)).)))))...)))))))).)).))))))......

Structure
--AGAA      C  UC        Gcga     g  u 
      GAAAAU GC  CGUCAGAA    uuuua cc u
      |||||| ||  ||||||||    ||||| ||  
      uuuuua cg  guaguuuu    aaaau gg u
uauuua      c  -u        -aaa     a  u 


Annotation confidence Not enough data
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Genome context
JH137968.1: 710277-710350 [+]

Database links

Mature stu-miR8013

Accession MIMAT0030909
Description Solanum tuberosum stu-miR8013 mature miRNA
Sequence 1 - AGAAGAAAAUCGCUCCGUCAGAAG - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233