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miRBase |
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Stem-loop sequence stu-MIR8007a |
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Accession | MI0025808 (change log) | ||||
Description | Solanum tuberosum miR8007a stem-loop | ||||
Gene family | MIPF0001839; MIR8007 | ||||
Literature search |
3 open access papers mention stu-MIR8007a | ||||
Stem-loop |
-- ga u a c c a u -uu a -ucuu -aca u -----uca a c 5' auguggcacuuuucg uuuugaga uuaaaca gu uaa uuug cug aaauuu cau ga uuaa uuuugaa ua auauuugugaauuau gua u ||||||||||||||| |||||||| ||||||| || ||| |||| ||| |||||| ||| || |||| ||||||| || ||||||||||||||| ||| u 3' uacaccgugaaaagu aaagcucu aguuugu ca auu aaac gau uuuaaa gua cu aguu aaaacuu au uauaaacauuugaug cau u aa aa c - a c c c ugc - uuacu aaaa u uuuaaaca - u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence stu-miR8007a-5p |
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Accession | MIMAT0030899 |
Sequence |
1 - auguggcacuuuucggauuuugag - 24 |
Evidence | experimental; Illumina [1] |
Mature sequence stu-miR8007a-3p |
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Accession | MIMAT0031193 |
Sequence |
203 - cgaaaaaugaaaagugccacauaa - 226 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:23437348
"Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing"
PLoS One. 8:e57233(2013).
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