miRBase entry: stu-MIR7999

Stem-loop stu-MIR7999


Accession
MI0025798
Description
Solanum tuberosum stu-MIR7999 precursor miRNA


Sequence

CUGGGUCACUUCUACGGGUCCUUCcuACGACCCGUAGAACUGCCCACGAC
.((((.((.(((((((((((........))))))))))).))))))....

Structure
---C    U  C           CUU 
    UGGG CA UUCUACGGGUC   C
    |||| || |||||||||||    
    ACCC GU AAGAUGCCCAG   c
CAGC    -  C           CAu 


Annotation confidence Not enough data
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Genome context
JH137869.1: 1426335-1426384 [+]

Database links

Mature stu-miR7999-5p

Accession MIMAT0031189
Description Solanum tuberosum stu-miR7999-5p mature miRNA
Sequence 1 - CUGGGUCACUUCUACGGGUCCUUC - 24
Evidence experimental
Illumina [1]

Mature stu-miR7999-3p

Accession MIMAT0030889
Description Solanum tuberosum stu-miR7999-3p mature miRNA
Sequence 27 - ACGACCCGUAGAACUGCCCACGAC - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233