Stem-loop sequence stu-MIR7984c

Accession

MI0025770 (change log)

Description

Solanum tuberosum miR7984c stem-loop

Gene family

MIPF0001671; MIR7984

Literature search

1 open access papers mention stu-MIR7984c
(1 sentences)

Stem-loop

   --                                                                                a  caucauaaaaau     c    u 
5'   acgauaccaaacuuuaugaaggaccuuuuauucccugcacuauuuaauaguguauuuuaaagguauauaugugcccacgu ga            ugcau auua a
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            ||||| ||||  
3'   ugcuaugguuugaaauacuuccuggaaaauaagggacgugauaaauuaucacauaaaauuuccauauauacacgggugca cu            augua ugau a
   aa                                                                                c  ------------     a    a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (SolTub3.0; GCA_000226075.1): JH138777.1: 6817-7020 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025770

Mature sequence stu-miR7984c-5p

• Accession: MIMAT0030861
• Sequence: 1 - acgauaccaaacuuuaugaaggac - 24
• Evidence: experimental; Illumina [1]

Mature sequence stu-miR7984c-3p

• Accession: MIMAT0031185
• Sequence: 181 - ccuucauaaaguuugguaucguaa - 204
• Evidence: experimental; Illumina [1]

References

1. PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).