miRBase entry: bta-mir-2285ae

Stem-loop bta-mir-2285ae


Accession
MI0025543
Description
Bos taurus bta-mir-2285ae precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285ae
(15 sentences)

Sequence

96 reads, 11 reads per million, 24 experiments
AGAAAGUUCAUUUAGGUUUUUCuauaggaugcuguggaaaaacuugaacggacuuuuuggc
(((((((((.(((((((((((((((((....))))))))))))))))).)))))))))...

Structure
---         A                 g 
   AGAAAGUUC UUUAGGUUUUUCuauag a
   ||||||||| |||||||||||||||||  
   uuuuucagg aaguucaaaaagguguc u
cgg         c                 g 


Annotation confidence Not enough data
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Genome context
chr8: 74016989-74017049 [+]

Database links

Mature bta-miR-2285ae

Accession MIMAT0030448
Description Bos taurus bta-miR-2285ae mature miRNA
Sequence 1 - AGAAAGUUCAUUUAGGUUUUUC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23472090
    Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
    Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
    PLoS One (2013) 8:e57543