miRBase entry: bta-mir-2285aa

Stem-loop bta-mir-2285aa


Accession
MI0025530
Description
Bos taurus bta-mir-2285aa precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285aa
(15 sentences)

Sequence

1363 reads, 44 reads per million, 69 experiments
caaaaaguucguccagauuuuuccauaagauguuacagaAAAACUGGAACGAACUUUUGGGC
..((((((((((((((.((((((..(((....)))..)))))))))).))))))))))....

Structure
--ca          -    a      ca   g 
    aaaaguucgu ccag uuuuuc  uaa a
    |||||||||| |||| ||||||  |||  
    UUUUCAAGCA GGUC AAAAag  auu u
CGGG          A    -      ac   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 5210613-5210674 [+]

Database links

Mature bta-miR-2285aa

Accession MIMAT0030435
Description Bos taurus bta-miR-2285aa mature miRNA
Sequence 40 - AAAACUGGAACGAACUUUUGGGC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23472090
    Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
    Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
    PLoS One (2013) 8:e57543