Stem-loop ptc-MIR7821

Accession

MI0025502

Description

Populus trichocarpa ptc-MIR7821 precursor miRNA

Sequence

gaugccuauguuuuuuucugucacaaugccaauaccuaucuagaccacaggauuugccauugcauucacaucuaguggaucAGAUGGGCAUCGGCAUUGUGAagaugggcau
.((((((((.(.........((((((((((.((.(((((((.((((((.((((.(((....))).....)))).)))).))))))))).)).))))))))))).))))))))

Structure

g        g uuuuuucug          a  a       a  -    a    ----u   c 
 augccuau u         ucacaaugcc au ccuaucu ga ccac ggau     ugc a
 |||||||| |         |||||||||| || ||||||| || |||| ||||     |||  
 uacgggua a         AGUGUUACGG UA GGGUAGA cu ggug ucua     acg u
-        g ---------          C  C       -  a    a    cacuu   u 

Annotation confidence Not enough data

Genome context

CM000349.2: 797593-797704 [-]

Mature ptc-miR7821

• Accession: MIMAT0030402
• Description: Populus trichocarpa ptc-miR7821 mature miRNA
• Sequence: 82 - AGAUGGGCAUCGGCAUUGUGA - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233