Stem-loop ptc-MIR7833

Accession

MI0025492

Description

Populus trichocarpa ptc-MIR7833 precursor miRNA

Sequence

uuccucgucuUAAUUAGAACUCAUACUAGACaaacuaguggauccuuaucuaauccucuaguaugaguucuaauuaagagguggaaa
((((.(.(((((((((((((((((((((((........(((((....)))))....))))))))))))))))))))))).).)))).

Structure

-    u g                       Caaacuag     c 
 uucc c ucuUAAUUAGAACUCAUACUAGA        uggau c
 |||| | |||||||||||||||||||||||        |||||  
 aagg g agaauuaaucuugaguaugaucu        aucua u
a    u g                       ----ccua     u 

Annotation confidence Not enough data

Genome context

CM000349.2: 3364782-3364868 [+]

Mature ptc-miR7833

• Accession: MIMAT0030392
• Description: Populus trichocarpa ptc-miR7833 mature miRNA
• Sequence: 11 - UAAUUAGAACUCAUACUAGAC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233