miRBase entry: ptc-MIR7822

Stem-loop ptc-MIR7822


Accession
MI0025481
Description
Populus trichocarpa ptc-MIR7822 precursor miRNA


Sequence

auuugaugugUUUGAAAUUGAACAAAUGGUAacaaccauggcauggauuugcaggaaaaguuucauuaugcaugguuguuaccauuuguucaauuucaaacacaucaaauu
((((((((((((((((((((((((((((((((((((((((.(((((....((.......))....))))))))))))))))))))))))))))))))))))))))))))).

Structure
-                                        g     auuu  ag 
 auuugaugugUUUGAAAUUGAACAAAUGGUAacaaccaug caugg    gc  g
 |||||||||||||||||||||||||||||||||||||||| |||||    ||  a
 uaaacuacacaaacuuuaacuuguuuaccauuguugguac guauu    ug  a
u                                        -     acuu  aa 


Annotation confidence Not enough data
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Genome context
CM000341.2: 17113917-17114027 [+]

Database links

Mature ptc-miR7822

Accession MIMAT0030381
Description Populus trichocarpa ptc-miR7822 mature miRNA
Sequence 11 - UUUGAAAUUGAACAAAUGGUA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23570526
    Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
    Shuai P, Liang D, Zhang Z, Yin W, Xia X
    BMC Genomics (2013) 14:233