miRBase entry: hhi-let-7j

Stem-loop hhi-let-7j


Accession
MI0025425
Description
Hippoglossus hippoglossus hhi-let-7j precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

ggucUGAGGUAGUUGUUUGUACAGUUugagggucugugauucugccccauacaggagcuaacuguacaagugacug
.........(((((((((((((((((..((((((...))))))((.((.....)).)).)))))))))))))))))

Structure
ggucUGAGG                 --------------ug      u 
         UAGUUGUUUGUACAGUU                aggguc  
         |||||||||||||||||                |||||| g
         gucagugaacaugucaa                ucuuag  
---------                 ucgaggacauaccccg      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hhi-let-7j

Accession MIMAT0030346
Description Hippoglossus hippoglossus hhi-let-7j mature miRNA
Sequence 5 - UGAGGUAGUUGUUUGUACAGUU - 26
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23626677
    Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
    Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
    PLoS One (2013) 8:e61378