miRBase entry: hhi-mir-449

Stem-loop hhi-mir-449


Accession
MI0025419
Description
Hippoglossus hippoglossus hhi-mir-449 precursor miRNA
Gene family
MIPF0000133; mir-449


Sequence

ugugguggguggcuggaAGGCAGUGUCUUGUUAGCUGGUUGauugugugagugccagcuuaccugcugcugcccuccaacuguccaca
....((((((((.((((.(((((((.(..((.(((((((.............))))))).))..).))))))).)))).)))))))).

Structure
ugug        c    A       U UU  U       UGauu 
    gugggugg ugga GGCAGUG C  GU AGCUGGU     g
    |||||||| |||| ||||||| |  || |||||||     u
    caccuguc accu ccgucgu g  ca ucgaccg     g
---a        a    c       c uc  u       ugagu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hhi-miR-449

Accession MIMAT0030340
Description Hippoglossus hippoglossus hhi-miR-449 mature miRNA
Sequence 18 - AGGCAGUGUCUUGUUAGCUGGUUG - 41
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23626677
    Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
    Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
    PLoS One (2013) 8:e61378