miRBase entry: bdi-MIR7784a

Stem-loop bdi-MIR7784a


Accession
MI0025406
Description
Brachypodium distachyon bdi-MIR7784a precursor miRNA
Gene family
MIPF0001728; MIR7784


Sequence

caaauaccccguGUACAUGAACUUAUAAGACGAGUAcaacguaugguacaucacauguaucuuauuaguuuuuaaguaccucguguaCAUAGACUUAUGAGACGAGUACAUcguaugguacau
....((((.(((((((.((..((((((((.(..(((((.((...(((((........((......))........))))).)))))))...).)))))))).)).))))).))...))))...

Structure
caaa    --c  -     A  AA        A -GA     a  uau     aucacaug  uc 
    uacc   cg uGUAC UG  CUUAUAAG C   GUAca cg   gguac        ua  u
    ||||   || ||||| ||  |||||||| |   ||||| ||   |||||        ||   
    augg   gc ACAUG GC  GAGUAUUC G   Caugu gc   ccaug        au  u
-uac    uau  U     A  -A        A AUA     -  --u     aauuuuug  ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
4: 4781925-4782047 [+]

Database links

Mature bdi-miR7784a-5p

Accession MIMAT0030322
Description Brachypodium distachyon bdi-miR7784a-5p mature miRNA
Sequence 13 - GUACAUGAACUUAUAAGACGAGUA - 36
Evidence experimental
Illumina [1]

Mature bdi-miR7784a-3p

Accession MIMAT0030323
Description Brachypodium distachyon bdi-miR7784a-3p mature miRNA
Sequence 88 - CAUAGACUUAUGAGACGAGUACAU - 111
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443