miRBase entry: bdi-MIR7780

Stem-loop bdi-MIR7780


Accession
MI0025402
Description
Brachypodium distachyon bdi-MIR7780 precursor miRNA


Sequence

ugggagccccaugaaugagggagaagaggGAUAAUUUAGUGGCCUUCCUACUUuagugguuuaaGUAGGGACCUUGCUGAAGACGUUUuuuuucuucuag
((((...)))).......((((((((((((((..((((((((..(((((((((.........)))))))))..))))))))...))))))))))))))..

Structure
ugggagccccaugaauga              -AA        CC         uag 
                  gggagaagaggGAU   UUUAGUGG  UUCCUACUU   u
                  ||||||||||||||   ||||||||  |||||||||   g
                  ucuucuuuuuUUUG   AAGUCGUU  AGGGAUGaa   g
----------------ga              CAG        CC         uuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
1: 68651831-68651930 [-]

Database links

Mature bdi-miR7780-5p

Accession MIMAT0030314
Description Brachypodium distachyon bdi-miR7780-5p mature miRNA
Sequence 30 - GAUAAUUUAGUGGCCUUCCUACUU - 53
Evidence experimental
Illumina [1]

Mature bdi-miR7780-3p

Accession MIMAT0030315
Description Brachypodium distachyon bdi-miR7780-3p mature miRNA
Sequence 65 - GUAGGGACCUUGCUGAAGACGUUU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443