Stem-loop bdi-MIR7753

Accession

MI0025371

Description

Brachypodium distachyon bdi-MIR7753 precursor miRNA

Sequence

auuuucguaccaaaaugcccAUGUCUUCUUCCUUGCUCAUCuucuuccucugugccugcaaagucuuccacugcugcuagccccugcaagcucauccuucucgccucucaugcuggccaucuuccucugucacuggauggaucaaggagaUGAGCAAGGGAGAAGACAUGGguauuuuggucagaaa
..((((..((((((((((((((((((((((((((((((((((((((..((((.((.((((..(.((..((....))..)).)..)))).)).))........(((.........)))(((((............)))))))..))))))))))))))))))))))))))))))))))))))..))))

Structure

au    gu                                      cc  ---------------------------------------------  u  c    aa u  uc  c 
  uuuc  accaaaaugcccAUGUCUUCUUCCUUGCUCAUCuucuu  uc                                             ug gc ugca  g cu  ca u
  ||||  ||||||||||||||||||||||||||||||||||||||  ||                                             || || ||||  | ||  ||  
  aaag  ugguuuuaugGGUACAGAAGAGGGAACGAGUagaggaa  ag                                             ac cg acgu  c ga  gu g
--    ac                                      cu  guaggucacugucuccuucuaccggucguacucuccgcucuuccu  u  a    cc c  uc  c 

Annotation confidence Not enough data

Genome context

1: 22204188-22204374 [+]

Mature bdi-miR7753-5p

• Accession: MIMAT0030246
• Description: Brachypodium distachyon bdi-miR7753-5p mature miRNA
• Sequence: 21 - AUGUCUUCUUCCUUGCUCAUC - 41
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7753-3p

• Accession: MIMAT0030247
• Description: Brachypodium distachyon bdi-miR7753-3p mature miRNA
• Sequence: 151 - UGAGCAAGGGAGAAGACAUGG - 171
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443