Stem-loop bdi-MIR7749

Accession

MI0025367

Description

Brachypodium distachyon bdi-MIR7749 precursor miRNA

Sequence

gucacgggccgaggaggcAUCGUCGAGGGCGGAGAUUGCGGCggccggcgcgcgugugugcugcuuuuagcacgaggaguaagacggacacgagcgcucgugcgagcaUGGAAUGGGCGCUCUCAGGGAAGCuggcccaagagcga
.....(((((.....(((.((.(.(((((((...(((.((((.((((((((.(((((.((((((((((......)))))).)).)).))))).)))).)).))..)).)).)))...))))))).).)).))))))))........

Structure

---gucac     gagga   A  G C       GAG   G  -  -g  -  -    g     g  -  -      ag 
        gggcc     ggc UC U GAGGGCG   AUU CG GC  gc cg gcgc cgugu ug cu gcuuuu  c
        |||||     ||| || | |||||||   ||| || ||  || || |||| ||||| || || ||||||   
        cccgg     uCG AG G CUCUCGC   UAA GU cg  cg gc cgcg gcaca gc ga ugagga  a
agcgagaa     -----   A  G A       GGG   G  a  ag  u  u    a     g  a  a      gc 

Annotation confidence Not enough data

Genome context

5: 16482116-16482261 [-]

Mature bdi-miR7749-5p

• Accession: MIMAT0030238
• Description: Brachypodium distachyon bdi-miR7749-5p mature miRNA
• Sequence: 19 - AUCGUCGAGGGCGGAGAUUGCGGC - 42
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7749-3p

• Accession: MIMAT0030239
• Description: Brachypodium distachyon bdi-miR7749-3p mature miRNA
• Sequence: 109 - UGGAAUGGGCGCUCUCAGGGAAGC - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443